CDS
| Accession Number | TCMCG066C00908 |
| gbkey | CDS |
| Protein Id | XP_034603934.1 |
| Location | join(7140369..7140494,7140591..7141124,7141226..7141306,7141388..7141505,7141697..7141899,7142063..7142170,7143148..7143249,7143590..7143790,7143894..7144004,7144564..7144631,7145814..7146180,7146445..7146600,7146687..7146797,7147295..7147348,7147973..7148230,7149226..7149335,7150210..7150363,7154515..7154977,7155661..7155875,7156335..7156573,7156699..7156825,7156904..7157116) |
| Gene | LOC117864035 |
| GeneID | 117864035 |
| Organism | Setaria viridis |
Protein
| Length | 1372aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034748043.1 |
| Definition | DExH-box ATP-dependent RNA helicase DExH11 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | rRNA-processing arch domain |
| KEGG_TC | - |
| KEGG_Module |
M00392
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12599
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGACGGCCCTGACCCCTCGCCGGCGAGCGAGTTGCCGTTCCGCATCAGCTTCTCCGGCCACGGCGGCCACCTCCGCCTCGACCCTACCCCGCAACCGTCCAGCACCATTCCCGACTTCGTCCCGCCGCCGGCCTACCCGCCTGGGAGCCCGAGCAGCGTGAAGGAGTACCTCGAGGCGAACTACCTCAACCCCGAGCTCCACCTCCCCACCGCGGCCGATGCCGGGAGGGTGTGGGACTTGGACTGGTTCGCCCTGGCCAAGCCACCGCTGGAGCCCTCCGCTCCCCGCACCATGCTCGCGCCCGCCTGGGAGCCGCCTTTCCGGCGCGGTCGGGGGACGTCGCAGTCCGCGTCGGAGCCGCAAGTATGGGATCCTGAGTCCGTGCAGATGGAGATGGGCGAGGTGTTCGGTTCGGGGACCGGGGGGTTGGCGCCGCGGATGCCTGGTCCGGCGAAGGACTTCGTCAGGGGGAGCATCAACAACAGACCCTTTCGTCCGGGTGGTCTACTGGATGATGATGCTGAGGTGGCTGCATTGGAGAAGGCATTCCCAGAGGGTGCGCGGAACGGTGATTGGGTGCATGAGCTTATGACCGGTGGCCCGGCGCAGGTTGCTCCTCCGGGGTTCCGCAAGGGATTGGAGTTGGGCCAGTTGAAGGAGTATAAAAGCCACTGGAAGTGTTTCCGGAATGGAGAACTTGTAGAGGAGCAACCTGCATCGTCATCGAATGATACAATGGAAAAATACTCGGTGCAGTTTGATGATCTTTTCAAGATAGCTTGGGAGGAAGATGCCGCCAACAAGGCGTTACAGGAGGATGATGTTCAACAATCAGCTGAAGATGAGGGAACTGAAGGAGTTGGTGAACAAAAAGTTGATGCATTGCAAGATGCTTCTGAGACCGTAACCAAGCTAGATGCTGAGAAACATGAAGTAGATGCTATAAGTGATGATCCTGGAACTCAAACAGACTTGGATCTAATGCTATCTGCTGAAGTTCAATATGCACGAAGAGAATCAGGTGTATCAGGTGATGACAAGCCAACACAGGATGGCAAGGTTTGGGCACTTGTTGGCGGGGACGAAGACATTGTGACTAACTTCTACAAACTCGTTCCTGATATGGCAATTGAATTTCCATTTGAATTAGATAAGTTCCAGAAGGAGGCTATATATTATCTTGAGAAAGGTGAATCAGTCTTCGTTGCAGCCCATACTTCAGCAGGAAAGACAGTTGTTGCCGAGTATGCATTTGCTTTAGCAACAAAACATTGTACTCGGGCTGTCTATACTGCTCCTATTAAAACTATCAGCAACCAGAAATACCGAGATTTCTCTGGGAAGTTTGATGTAGGACTTCTGACAGGAGATGTCAGTATCAGGCCAGAGGCAACTTGTTTAATTATGACTACTGAAATATTGCGCTCAATGCTCTACAGAGGTGCGGACATTATACGCGATATTGAATGGGTAATCTTTGATGAAGTGCATTATGTAAACGACGCTGAAAGAGGTGTAGTTTGGGAGGAGGTTATTATAATGCTCCCGAAGCACATTAACATTGTTCTTCTTTCGGCAACGGTTCCAAATACAGTTGAATTTGCTGACTGGATTGGTCGAACAAAGCAGAAGAAAATTCGTGTCACTTCGACCAACAAAAGGCCTGTTCCGCTTGAGCATTGCTTGTTCTACTCTGGAGAAGTGTACAAAATATGCGAGAGGGATACCTTTCTTACTCAAGGATTTAGAGAAGCAAAAGATTCTTTCAAAAAGAAAAATTCGAACAAGCTTGGAGTGAAACCTGGTCCAAAGTCAGGAACCCCTGCAGTACGTGCTGGAACTCAAGGCAAAAACCCAGATACATCAAACAGGGGGAGAGATCAGAAGTACCCAAAGCACCACAATGCCAATTCAGGATCAGCAGCGGTTCCACAAAGCTCCTCAGGGCCAAAGAGACCAGACTCTTCATTTTGGATGCCGCTTGTGAATAACCTTCTGAAGAAATCCCTAGTGCCTGTGGTGATCTTTTGTTTCTCAAAGAATCGTTGTGATAGATCGGCAGATAGCATGTTTGGCGCTGATCTCACCAGTAGTTCGGAGAAAAGTGAAATCCGTGTCTTCTGTGACAAGGTGTTTTCACGCCTTAAAGGATCTGATAGGAACCTTCCACAGGTTGTGGGAATACAAAGCCTTCTACGAAGAGGAATTGGAGTGCACCATGCTGGGCTTCTCCCTATTGTGAAGGAAGTAGTTGAGATGCTATTCTGTCGTGGTGTGATCAAGGTACTGTTTTCCACTGAAACATTTGCAATGGGTGTTAATGCACCAGCAAGAACGGTTGTATTTGATTCCTTAAGAAAGTTTGATGGAAAAGAACACCGAAAATTGCTTCCAGGGGAGTATATTCAAATGGCTGGACGAGCTGGTAGGAGAGGACTTGATAACATTGGTACAGTGATCATTATGTGTCGTGATGAAATTCCTGAAGAAAGTGATTTGAAAAATTTGATTGTTGGAAAACCAACTCGATTGGAATCTCAATTTCGATTAACATACACTATGATACTACATCTTCTACGTGTGGAGGAGCTGAAGGTTGAGGACATGCTCAAGAGAAGTTTTGCAGAATTCCATGCACAAAAGAATTTGCCAGAGAAGGAAAAGCTACTTCTACAAATGCTTCGTCAACCTACAAAGACAATAGATTGCATAAAAGGAGAGCCTTCAATTGAAGAATACTATGAGATGGCATTAGAAGCTGAGGCACATAGGGAATCTATAACAGAAGCAATCATGCAGTTGCCCAGTACTCAACAGTTCCTTATGCCTGGGAGATTGGTGGTCGTTAAATCTGAATCTGATGATGATCACTTACTTGGTGTTATACTGAAATGTCCATCGCAAACACTAAATAAATACATTGTCCTTGTATTGACTGGTGATTGCACTTCATCTGCGTTATCCCCTGTGTTGTCCAATAAAACTGAAAAGGAACCTGGGGATTTCCAACAAGGACACTTTATTATCCCGAAAGGAAAACGTGGCATGGAGGATGAGTATTTCTCATCTGGCAGCTCACGAAAAGGTTCAGTTGTTATCAAAATCCCCCTACCATACAAGGGGGATGCATCTGGAATGGGCTTTGAAGTAAGAGCAATAGAGAAAAAAGAGATCATGAGTATATGCACCTGCAAAATAAAGATTGATCAAGTCAAACTCCTTGAGGATTGTAGCAAAGCTGCTTACTCCAAAACTGTCCAACTGCTTATAAAAGAGCAACCAGATGGAACTAAGTATCCTCCTGCTTTAGATGCAATAAAAGATCTAAAATTGAGGGACATGCATTTTGTTGAAAGATACATTGCATATCACAGACTACTGCAAAAAATATCTGAAAACAAGTGCCATGGTTGTATAAAACTAAAGGAGCATATATCATTGATGAGGGAGCAAAAGATGTACAAGGATCAGCTGAATGAATTGAAATTCCAGATGTCAGATGAGGCGCTTCAACAGATGCCGGAGTTTCAAGGCAGAATTGATGTACTAAAGGTAATCAACTACATTGATTCTGATCTAGTTGTGCAACTTAAGGGACGAGTAGCCTGTGAAATGAACTCAGGAGAGGAGTTAATATCCACAGAATGTCTGTTTGAGAATCAATTGGATGACCTAGAACCTGAAGAAGCTGTGGCCATTATGTCTGCATTCGTCTTCCAACAGAGGAATGCATCAGAACCATCTCTTACTCCAAAATTGGCTGAAGCCAAAAAGAGGCTTTATGACACGGCAATCAGACTAGGACAGCTCCAAGCACAGTTCAAGGTGCCTGTGGATCCCGAGGAGTATGCACGTGACAATCTCAAGTTTGGCCTTGTTGAGGTTGTCTACGAGTGGGCAAAGGGAACACCTTTCGCCGACATATGTGAGCTGACAGATGTATCCGAGGGGCTCATTGTAAGAACGATCGTTCGGCTGGATGAAACATGCAGAGAATTCAGGAATGCAGCTTCGATAATGGGGAACTCTGCGCTGTACAAGAAGATGGAGGTCGCGTCCAATGCTATTAAGCGTGACATTGTGTTTGCAGCAAGCTTGTATGTCACAGGAATCTGA |
| Protein: MDGPDPSPASELPFRISFSGHGGHLRLDPTPQPSSTIPDFVPPPAYPPGSPSSVKEYLEANYLNPELHLPTAADAGRVWDLDWFALAKPPLEPSAPRTMLAPAWEPPFRRGRGTSQSASEPQVWDPESVQMEMGEVFGSGTGGLAPRMPGPAKDFVRGSINNRPFRPGGLLDDDAEVAALEKAFPEGARNGDWVHELMTGGPAQVAPPGFRKGLELGQLKEYKSHWKCFRNGELVEEQPASSSNDTMEKYSVQFDDLFKIAWEEDAANKALQEDDVQQSAEDEGTEGVGEQKVDALQDASETVTKLDAEKHEVDAISDDPGTQTDLDLMLSAEVQYARRESGVSGDDKPTQDGKVWALVGGDEDIVTNFYKLVPDMAIEFPFELDKFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKFDVGLLTGDVSIRPEATCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNTVEFADWIGRTKQKKIRVTSTNKRPVPLEHCLFYSGEVYKICERDTFLTQGFREAKDSFKKKNSNKLGVKPGPKSGTPAVRAGTQGKNPDTSNRGRDQKYPKHHNANSGSAAVPQSSSGPKRPDSSFWMPLVNNLLKKSLVPVVIFCFSKNRCDRSADSMFGADLTSSSEKSEIRVFCDKVFSRLKGSDRNLPQVVGIQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDSLRKFDGKEHRKLLPGEYIQMAGRAGRRGLDNIGTVIIMCRDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHAQKNLPEKEKLLLQMLRQPTKTIDCIKGEPSIEEYYEMALEAEAHRESITEAIMQLPSTQQFLMPGRLVVVKSESDDDHLLGVILKCPSQTLNKYIVLVLTGDCTSSALSPVLSNKTEKEPGDFQQGHFIIPKGKRGMEDEYFSSGSSRKGSVVIKIPLPYKGDASGMGFEVRAIEKKEIMSICTCKIKIDQVKLLEDCSKAAYSKTVQLLIKEQPDGTKYPPALDAIKDLKLRDMHFVERYIAYHRLLQKISENKCHGCIKLKEHISLMREQKMYKDQLNELKFQMSDEALQQMPEFQGRIDVLKVINYIDSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSAFVFQQRNASEPSLTPKLAEAKKRLYDTAIRLGQLQAQFKVPVDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVSEGLIVRTIVRLDETCREFRNAASIMGNSALYKKMEVASNAIKRDIVFAASLYVTGI |